Learning log for lazy Sunday

FROM jupyter/base-notebook:python-3.9.12

LABEL name="pymc"
LABEL description="Environment for PyMC version 4"

ENV LANG=C.UTF-8 LC_ALL=C.UTF-8

# Switch to jovyan to avoid container runs as root
USER $NB_UID

COPY /conda-envs/environment-dev.yml .
RUN mamba env create -f environment-dev.yml && \
    /bin/bash -c ". activate pymc-dev && \
    mamba install -c conda-forge -y pymc" && \
    conda clean --all -f -y

# Fix PkgResourcesDeprecationWarning
RUN pip install --upgrade --user setuptools==58.3.0

#Setup working folder
WORKDIR /home/jovyan/work

# For running from bash
SHELL ["/bin/bash","-c"]
RUN echo "conda activate pymc-dev" >> ~/.bashrc && \
    source ~/.bashrc

# For running from jupyter notebook
EXPOSE 8888
CMD ["conda", "run", "--no-capture-output", "-n", "pymc-dev", "jupyter","notebook","--ip=0.0.0.0","--port=8888","--no-browser"]

#! /bin/bash

COMMAND="${1:-jupyter}"
SRC_DIR=${SRC_DIR:-`pwd`}
CONTAINER_NAME=${CONTAINER_NAME:-pymc}
PORT=${PORT:-8888}

# stop and remove previous instances of the pymc container to avoid naming conflicts
if [[ $(docker ps -aq -f name=${CONTAINER_NAME}) ]]; then
   echo "Shutting down and removing previous instance of ${CONTAINER_NAME} container..."
   docker rm -f ${CONTAINER_NAME}
fi

# $COMMAND can be either `build` or `bash` or `jupyter`
if [[ $COMMAND = 'build' ]]; then
   docker build \
      -t ${CONTAINER_NAME} \
      -f $SRC_DIR/scripts/Dockerfile $SRC_DIR

elif [[ $COMMAND = 'bash' ]]; then
   docker run -it -v $SRC_DIR:/home/jovyan/work --rm  --name ${CONTAINER_NAME} ${CONTAINER_NAME} bash
else
   docker run -it -p $PORT:8888 -v $SRC_DIR:/home/jovyan/work --rm  --name ${CONTAINER_NAME} ${CONTAINER_NAME}
fi